For collaborations within the University Hospital Essen, University of Duisburg-Essen, and the UAMR (University Alliance of the Ruhr Metropolitan Area), we offer the following services, subject to certain conditions.
Please inquire for details.
Standard Read Mapping
Summary: Mapping of next generation sequence reads against a reference genome using the Burrows-Wheeler Aligner (BWA) [Details].
Summary: From mapped sequence reads, find genomic areas with significant tag enrichment (peaks) and evaluate their association with known transcription factor binding sites [Details].
Differential Expression Analysis from NGS
Summary: From mapped sequence reads, find differentially expressed genes or transcripts between given classes [Details].
Fusion Gene Discovery
Summary: Detection of fused genes from transcriptome paired-end sequencing data. [Details]
Variation Discovery and Scoring