Services

For collaborations within the University Hospital Essen, University of Duisburg-Essen, and the UAMR (University Alliance of the Ruhr Metropolitan Area), we offer the following services, subject to certain conditions.
Please inquire for details.


Standard Read Mapping

Summary: Mapping of next generation sequence reads against a reference genome using the Burrows-Wheeler Aligner (BWA) [Details].
Contact:


ChIP-Seq Analysis

Summary: From mapped sequence reads, find genomic areas with significant tag enrichment (peaks) and evaluate their association with known transcription factor binding sites [Details].
Contact:


Differential Expression Analysis from NGS

Summary: From mapped sequence reads, find differentially expressed genes or transcripts between given classes [Details].

Contact:

Enrichment Analysis

Summary: Enrichment analysis for overrepresentation of GO terms, KEGG pathways of PFAM domains in a specified gene list [Details].
Contact: Daniela Beißer.


Fusion Gene Discovery

Summary: Detection of fused genes from transcriptome paired-end sequencing data. [Details]
Conact:


Variation Discovery and Scoring

Summary: tbd.
Contact: N.N.